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Computational Pathology Scientist

The Fountain Group LLC

South San Francisco, CA

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JOB DETAILS
SALARY
$50–$62 Per Hour
SKILLS
Algorithms, Amazon Elastic Compute Cloud (EC2), Analysis Skills, Artificial Intelligence (AI), Bioinformatics, Biology, Biomedical Engineering, Biomedical Research, Cloud Computing, Communication Skills, Computer Programming, Computer Science, Computer Systems, Computer Vision, Continuous Improvement, Cross-Functional, Data Analysis, Data Science, Data Sets, Data Visualization, Decision Support, Deep Learning, Ecosystems, Git, GitHub, Graphical User Interface (GUI), Histopathology, Image Processing, Interpersonal Skills, Machine Learning, Pathology, Problem Solving Skills, Process Analysis, Python Programming/Scripting Language, Sales Pipeline, Scientific Research, Software Development, Source Code/Configuration Management (SCM), Statistics, Team Player, Translational Research, Workflow Analysis
LOCATION
South San Francisco, CA
POSTED
8 days ago
Details for the position are as follows:
  • 6 month contract to start with the possibility of extension or conversion depending on performance and business needs
  • Rate: $50-62 an hour
  • Location: South San Francisco, CA – 100% onsite
  • Interview process: 1. Virtual 2. Onsite
Job Description:
  • We are seeking an Image Data Scientist to join the Digital Pathology team in a contract capacity. This individual will contribute to the development and implementation of advanced image analysis pipelines and computational workflows supporting digital pathology initiatives.
  • The role combines computer vision, machine learning, deep learning, and image-processing expertise to improve pathology data analysis and support biologically meaningful interpretation of complex image datasets. The ideal candidate will have strong Python programming skills, hands-on experience with image analysis and machine learning workflows, and a collaborative mindset suited for interdisciplinary scientific environments.
  • The ideal candidate is a collaborative and technically strong computational scientist who is passionate about applying AI and computer vision approaches to biomedical research and digital pathology. This person thrives in cross-functional environments, communicates effectively with both technical and non-technical stakeholders, and enjoys solving complex biological problems through computational innovation.
  • Develop and apply image-processing pipelines using both traditional computer vision approaches and advanced machine learning/deep learning techniques.
  • Analyze and process large-scale digital histopathology and whole-slide imaging (WSI) datasets to support pathology evaluations and biological discovery efforts.
  • Collaborate closely with pathologists to design customized image analysis workflows aligned with scientific and translational research objectives.
  • Contribute to the development and implementation of AI-powered image analysis algorithms for pathology applications, including image classification, segmentation, and related computer vision tasks.
  • Perform statistical analyses, data interpretation, and data visualizations to support scientific decision-making.
  • Partner with computational scientists, data scientists, and cross-functional research teams to continuously improve digital pathology workflows and analytical approaches.
  • Support reproducible and scalable computational workflows using modern software development and version control practices.
Required Skills:
  • MS or PhD in Data Science, Computer Science, Bioinformatics, Computational Biology, Biomedical Engineering, or a related quantitative discipline.
  • Minimum of 5 years of relevant experience in image analysis, computer vision, machine learning, or computational pathology.
  • Strong Python programming skills and experience working within the scientific computing ecosystem, including libraries such as NumPy, Pandas, Scikit-learn, and OpenCV.
  • Hands-on experience with classical and modern computer vision/image analysis methods, including machine learning-based image classification and semantic segmentation approaches.
  • Experience processing and analyzing whole-slide images (WSI) or other large-scale imaging datasets using tools such as OpenSlide or similar libraries.
  • Experience with version control systems such as Git and collaborative development platforms including GitHub or GitLab.
  • Excellent communication and interpersonal skills with the ability to collaborate effectively across multidisciplinary scientific teams.
Preferred Qualifications:
  • Deep learning expertise using frameworks such as PyTorch, TensorFlow, or Keras.
  • Experience developing advanced deep learning models for digital pathology applications, including instance segmentation and object detection workflows.
  • Familiarity with object detection frameworks such as Detectron2.
  • Experience working within High-Performance Computing (HPC) environments, including use of SLURM or similar job schedulers.
  • Experience with commercial digital pathology software platforms such as HALO, Visiopharm, or QuPath.
  • Knowledge of workflow orchestration and pipeline management tools such as Dagster or Airflow.
  • Experience developing lightweight research GUIs using Python frameworks such as Tkinter or PyQt.
  • Familiarity with cloud computing environments, particularly AWS EC2, for model training and deployment.


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About the Company

T

The Fountain Group LLC

The Fountain Group provides Contingent Labor, Statement-of-Work, and Contingent-to-Permanent resources to clients with an internal/external Contingent Labor Managed Service Program or Clients without a program. The Fountain Group is committed to the belief that we all share in the responsibility to conduct our businesses in a socially and environmentally responsible manner. We base this on the premise that a company is much more than the products it offers. The effect a company has on the environment, the people and the communities it serves reflects the company’s dedication to being not only a good business, but to being a good corporate citizen. The Fountain Group believes the key to servicing a client is to identify the client demand precisely. Therefore, The Fountain Group focused its efforts on building and developing a process, which can identify an exact match for our client’s needs. Our process utilizes modern technology combined with 30+ years of Talent Acquisition experience to deliver Precision resources. Financial strength is prominent among The Fountain Group’s corporate values. The future of our business will be built on the innovation, compassion, outstanding services and technology, but a solid financial foundation is required to carry us forward to meet our business goal and support our long term vision.

COMPANY SIZE
500 to 999 employees
INDUSTRY
Staffing/Employment Agencies
WEBSITE
https://www.thefountaingroup.com/

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