Lead Automation Engineer, MES & Digital Systems - Project Farma

PerkinElmer

North Carolina

JOB DETAILS
SKILLS
Application Integration, Architectural Design, Asepsis, Automation, Automation Engineering, Biology, Biotech and Pharmaceutical, CIP (Clean-in-Place), Capital Project, Change Control, Chromatographic Systems, Commissioning, Communication Skills, Computerized Maintenance Management System (CMMS), Cross-Functional, Customer Relations, Customer Satisfaction, Data Quality, Design Document, Develop and Maintain Customers, Digital Circuit Design, Distributed Control Systems (DCS), Distribution Services, Documentation, ERP (Enterprise Resource Planning), Electricity, Failure Analysis, GMP (Good Manufacturing Practices), Government, Healthcare, ISA Standards, Identify Issues, Information Technology & Information Systems, Internet Security, Laboratory Information Management System (LIMS), Leadership, Manufacturing, Manufacturing Execution Systems (MES), Manufacturing Operations, Manufacturing Software, Manufacturing Systems, Mentoring, Multitasking, OEM (Original Equipment Manufacturer), Operational Support, Portfolio Analysis, Problem Solving Skills, Process Engineering, Process Validation, Product Strategy, Programmable Logic Controller (PLC), Recipe Development, Regulations, Requirements Management, Risk Analysis, Root Cause Analysis, SIP (Sterilization-in-Place), Service Delivery, Software Patches, Strategic Planning, Structured Analysis, Supervisory Control and Data Acquisition (SCADA), System Architecture, System Integration (SI), System Lifecycle, Systems Administration/Management, Testing, Vendor/Supplier Management, Willing to Travel, Writing Skills
LOCATION
North Carolina
POSTED
19 days ago

When joining PerkinElmer, you select an experienced and trusted leader in scientific solutions, with the support of a global service network and distribution centers, providing the right solution, at the right time, to meet critical customer needs.  With over an 80+ year legacy of advancing science and a mission of innovating for a healthier world, our dedicated team collaborates closely with commercial, government, academic and healthcare customers to deliver our broad portfolio of analytical solutions, and OneSource services.

Job Title

Lead Automation Engineer, MES & Digital Systems - Project Farma


Location(s)

US Remote - AL, US Remote - CA, US Remote - CO, US Remote - DC, US Remote - IL, US Remote - IN, US Remote - MA, US Remote - MD, US Remote - MO, US Remote - NC, US Remote - NJ, US Remote - NY, US Remote - OH, US Remote - OR, US Remote - PA, US Remote - TX, US Remote - VA

Job Description

This is a full-time, salaried position with Project Farma, a PerkinElmer company. The successful candidate will reside in one of Project Farma's primary markets and be willing to travel domestically, to meet client project requests.

  • Market locations include but are not limited to: Boston, Philadelphia, DMV, Northern New Jersey, Chicago, Indianapolis, Columbus, St Louis, Kansas City, Raleigh-Durham, Houston, Dallas, Boulder, Portland, San Francisco, San Diego, and Los Angeles.

The Lead Automation Engineer, MES & Digital Systems provides subject matter expertise in the design, implementation, and lifecycle management of digital systems across biologics, pharmaceutical, and novel therapy manufacturing facilities. This is a fully billable role, requiring experience with various MES platforms, Data Repositories, Serialization and integration to manufacturing applications (ERP, LIMS, CMMS, etc) and the ability to author, interpret, and lead documentation such as URS, FRS, Functional Narratives, and detailed system architecture designs.


In addition to technical experience, the Lead Automation Engineer, MES & Digital Systems acts as client liaison during delivery of Project Farma service engagements. They are strategically responsible for client satisfaction through project delivery while maintaining and growing client relationships. Key

Responsibilities
Automation Design & Architecture

  • Develop system architectures and data flows for biologics, pharmaceutical, and advanced therapy manufacturing (DCS, PLC/SCADA, MES, historians, network layers).
  • Develop product recipe strategies across the full application layer of ERP, MES and DCS Batch.
  • Detailed knowledge of Master data and how to define and control Master Data.
  • Create ISA-88/ISA-95-aligned architecture diagrams, inc Application and Data Flow diagrams.
  • Ensure architecture supports scalability, cybersecurity, data integrity, and multi-product flexibility.

URS / FRS / Design Documentation

  • Lead the creation, review, and approval of: URS (User Requirements Specifications), FRS (Functional Requirements Specifications), DS / DDS (Design Specifications), Functional & Control Narratives, Recipe Design Documentation (ISA-88 compliant), Automation Standards & Engineering Guidelines
  • Work cross functionally to translate process requirements into robust digital system design documents.

Digital System Implementation

  • Configure, program, and deploy Digital System within the manufacturing environment.
  • Develop, modify, and test MES (eBR, RbE, eLogbooks, Equipment Tracking, Weigh & Dispense), LIMS, Serialization and CMMS application functionality.
  • Support integration of OEM skids: bioreactors, chromatography systems, filtration skids, CIP/SIP, and fill finish equipment.

Commissioning, Validation & GMP Compliance

  • Detailed knowledge of FAT, SAT, IQ/OQ, and PQ protocols in alignment with GAMP 5 and 21 CFR Part 11.
  • 2/2
  • Ensure all changes meet data integrity requirements, change control processes, and validation lifecycle rules.
  • Lead deviation investigations, CAPAs, and risk assessments related to Digital systems.

Manufacturing & Operations Support

  • Serve as SME for troubleshooting, system optimization, batch failure analysis, and performance enhancements.
  • Support 24/7 operations through structured root cause analysis and resolution of Digital System issues.
  • Develop long-term lifecycle plans for upgrades, patches, and system expansions.

Cross Functional Leadership

  • Collaborate with IT/OT, process engineering, MSAT, quality, and capital project teams to deliver integrated system solutions.
  • Manage vendors, system integrators, and OEMs; review design packages and ensure alignment with internal standards.
  • Mentor junior engineers and act as technical SME during audits and regulatory inspections.

Experience Required

  • Bachelor’s degree in Engineering (Automation, Electrical, Chemical, Mechanical, or related).
  • Minimum 9-12+ years in automation engineering within GMP life sciences (biotech, pharma, ATMP).
  • Expert-level experience with various MES platforms, Data Repositories, Serialization and integration to manufacturing applications (ERP, LIMS, CMMS, etc).
  • Proven ability to author, interpret, and own URS/FRS/DS documentation.
  • Experience designing system applications and data flows across the full spectrum of manufacturing applications.
  • Strong understanding of ISA-88 batch control, ISA-95 manufacturing hierarchy, and GAMP 5.
  • Hands-on experience supporting biologics and sterile/aseptic manufacturing environments.
  • Understanding multisite standards for global manufacturers

Other Preferred

  • Strong communicator and influencer across engineering, quality, IT/OT, and manufacturing.
  • Structured thinker with advanced troubleshooting and problem solving skills.
  • Skilled at managing multiple priorities in a high pressure, regulated environment.
  • Demonstrated leadership and mentorship abilities.

Applicants must be authorized to work in the United States on a full-time basis. We will not sponsor applicants for current or future work visas for this position. This position may require significant travel to support project and business needs. We cannot employ anyone with an invalid driver's license

Project Farma will consider candidates' ranging from 7 - 18+ years' relevant experience. As such, the annual compensation range for this full-time position will range broadly. The final base pay offered to the successful candidate will be determined by factors including internal equity, work location, as well as individual qualifications, such as job-related skills, experience, and relevant education or training.

PerkinElmer is committed to creating a diverse environment and is proud to be an equal opportunity employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, gender, gender identity or expression, sexual orientation, national origin, genetics, disability status, age, or veteran status or any other characteristics protected by applicable law. PerkinElmer is committed to a culturally diverse workforce.

About the Company

P

PerkinElmer


A healthier future starts with the work we do today
At PerkinElmer, we design, manufacture and deliver advanced technology solutions that address the world's most critical health and safety concerns, including maternal and fetal health, clean water and air, and safe food and toys.

Our expertise combines science, innovation and a culture of operational excellence to offer our customers technology services and support that improve the quality of people's lives worldwide.

A Leader in Human Health
Whether it's testing newborns for life-threatening disorders, supporting scientists in finding better cures, or helping doctors treat disease, our focus on human health extends beyond the lab and into hospitals and homes. With our innovative screenings and treatments, and our ongoing development of advanced life science tools, we help generate earlier medical insights, more accurate results, and more effective therapies.

A Leader in Environmental Health
Our work in environmental health improves the quality and sustainability of our environment, and the security of people in the places where we live, work and play. This includes providing the analytical instrumentation, and services that ensure clean air and water; safe food and consumer products; and efficient, renewable energy - the essential components of a healthier, safer today and tomorrow.

COMPANY SIZE
5,000 to 9,999 employees
INDUSTRY
Biotechnology/Pharmaceuticals
WEBSITE
http://www.perkinelmer.com/