Pipeline Development & HPC/Cloud Architecture: Architect, develop, optimize, refactor, and maintain modular, containerized Nextflow pipelines for sequence analysis spanning wastewater metagenomics, isolate Whole Genome Sequencing (WGS), and metagenomic source attribution, ensuring portability across HPC and cloud/hybrid-cloud environments (e.g., AWS, Azure, GCP). Synthetic Construct & Bio-surveillance: Lead in silico screening efforts to detect synthetic genomic constructs and engineered sequence features within metagenomic and Whole Genome Sequencing (WGS) datasets, coordinating with biosecurity and laboratory partners to define detection criteria and validate findings.