Senior Bioinformatics Programmer NYU Langone HealthSenior Bioinformatics ProgrammerNew York, NYRemote$84,577.92–$105,039.78Full timeJob Responsibilities: · Enhance or develop new automated workflows/pipelines within a nextflow environment for bioinformatic tools utilizing next generation sequencing data in clinical diagnostic assays · Use existing bioinformatics pipelines to analyze the molecular patient data generated in the clinical lab · Oversee systems support for existing bioinformatics pipelines and develop new pipelines to support new molecular assays · Support the team in its common clinical genomics and precision medicine goals · Perform quality control of the generated sequencing data and develop solutions to enhance future performance · Perform different types of data analysis relating to the genomics-based approaches utilized by the lab, in an independent fashion. Ability to be onsite 3 to 5 days a week a must (possibility of full remote work is currently not available) NYU Langone Health, a world-class, patient-centered, integrated, academic medical center, and one of the nation’s premier centers for excellence in clinical care, biomedical research and medical education, is seeking highly motivated, enthusiastic individual to join the Department of Molecular Pathology working in the field of Clinical Genomics and Precision Medicine.
Senior Bioinformatics Programmer NYU Langone Medical CenterSenior Bioinformatics ProgrammerNew York, NYRemote$84,577.92–$105,039.78 / yearJob Responsibilities:· Enhance or develop new automated workflows/pipelines within a nextflow environment for bioinformatic tools utilizing next generation sequencing data in clinical diagnostic assays· Use existing bioinformatics pipelines to analyze the molecular patient data generated in the clinical lab· Oversee systems support for existing bioinformatics pipelines and develop new pipelines to support new molecular assays· Support the team in its common clinical genomics and precision medicine goals· Perform quality control of the generated sequencing data and develop solutions to enhance future performance· Perform different types of data analysis relating to the genomics-based approaches utilized by the lab, in an independent fashion.· Ability to be onsite 3 to 5 days a week a must (possibility of full remote work is currently not available)NYU Langone Health, a world-class, patient-centered, integrated, academic medical center, and one of the nation’s premier centers for excellence in clinical care, biomedical research and medical education, is seeking highly motivated, enthusiastic individual to join the Department of Molecular Pathology working in the field of Clinical Genomics and Precision Medicine.
Sr. Bioinformatics Developer NYU Langone HealthSr. Bioinformatics DeveloperNew York, NY$84,577.93–$135,224.49Full timeProcess and integrate VCF, XML, and BAM format files across all vendors and test types (somatic, germline, liquid biopsy, solid tumor) at gene and alteration levels. NYU Langone Health seeks an experienced Bioinformatics Developer to design, develop, and implement end-to-end molecular testing data integration pipelines.
Sr. Bioinformatics Developer NYU Langone Medical CenterSr. Bioinformatics DeveloperNew York, NY$84,577.93–$135,224.49 / yearProcess and integrate VCF, XML, and BAM format files across all vendors and test types (somatic, germline, liquid biopsy, solid tumor) at gene and alteration levels. NYU Langone Health seeks an experienced Bioinformatics Developer to design, develop, and implement end-to-end molecular testing data integration pipelines.
Senior Bioinformatics Analyst (AI/ML for Genomics) | Bioinformatics Resource Center Rockefeller UniversitySenior Bioinformatics Analyst (AI/ML for Genomics) | Bioinformatics Resource CenterNew York, New YorkFull timeWith a specific expertise in the processing and analysis of high-throughput genomic sequencing data, and in collaboration with both wet and dry lab biologists, the BRC aims to support and accelerate the diverse and cutting-edge research conducted at the university through the creation of analytical pipelines; the analysis of biological data via direct collaborations; and the training of Rockefeller's faculty, students, and scientific staff. Responsibilities: Responsibilities include: Design, implement, and maintain AI/ML pipelines for genomics and multi-omics data (RNA-seq, ATAC-seq, ChIP-seq, functional genomics).
Bioinformatics Analyst Albert Einstein College of MedicineBioinformatics AnalystBronx, New YorkPOSITION RESPONSIBILITIES: Pipeline development and leadership: Design, implement, document, and maintain end-to-end NGS pipelines for microbiome and HPV genomics applications (e.g., 16S/ITS1 amplicon sequencing, shotgun metagenomics, viral/HPV sequencing, bisulfite sequencing, and viral integration analyses). The ideal candidate is an independent problem solver who is comfortable taking ownership of analysis workstreams, building and maintaining reproducible pipelines, and driving projects forward from raw data to interpretable outputs.
Bioinformatics Engineer - LIMS TechDigitalBioinformatics Engineer - LIMSSecaucus, NJDevelop new or modify existing code using StarLIMS scripting languages, HTML5, Jscript, NET libraries, and Python following industry best practices. Work extensively within our cloud-based StarLIMS system to develop and configure frontend and backend solutions that further automate our scientific and technical processes.
Bioinformatics Engineer TechDigitalBioinformatics EngineerSecaucus, NJ3+ years of experience with a Bachelor's degree or 1+ year with a Master's degree and experience in an industrial or academic setting working with clinical and biological data or equivalent and underlying technologies including bioinformatic methods, database development, query/scripting/programming languages, cloud development, agile methodology, DevOps and other data analysis tools. • Develop, validate, and implement new software applications, databases, processes, and interfaces relating to next-generation sequencing (NGS) data analysis, advanced diagnostic testing development and validation, data quality review, and clinical reporting.
Bioinformatics PhD - Genomics Specialist MercorBioinformatics PhD - Genomics SpecialistNew York, New YorkRemote$70–$100 / hourCreate problems requiring skilled use of specialized scientific software like scanpy , scvelo , squidpy , and gudhi . For details about the interview process and platform information, please check: https://talent.docs.mercor.com/welcome.
Senior Scientist, Computational Biology Kidney Disease Boehringer IngelheimSenior Scientist, Computational Biology Kidney DiseaseRidgefield, CT$140,000–$222,000 / yearThis position involves the application of computational and bioinformatics techniques to identify and validate new therapeutic targets for kidney disease, with a strong emphasis on translating computational findings into biologically actionable hypotheses and experimental strategies. • Identify and prioritize potential therapeutic targets for kidney disease through integrative data analysis, articulating clear biological rationales, mechanisms, and testable hypotheses.
Scientist/Senior Scientist, Computational Biology VolastraScientist/Senior Scientist, Computational BiologyNew York, NY$140,000–$180,000 / yearRESPONSIBILITIES: Lead bioinformatics analyses across discovery sciences and translational sciences, including RNA-seq, single-cell RNA-seq, whole-exome sequencing, whole-genome sequencing, copy number, mutation, structural variant, CRISPR screen, proteomic, or other omics datasets as appropriate. This person will build and apply rigorous analyses of genomic, transcriptomic, functional genomic, and clinical-translational datasets to identify vulnerabilities, prioritize targets, nominate biomarkers, and connect preclinical findings to patient populations.
Scientist/Senior Scientist, Computational Biology Volastra TherapeuticsScientist/Senior Scientist, Computational BiologyNew York, NY$140,000–$180,000 / yearLead bioinformatics analyses across discovery sciences and translational sciences, including RNA-seq, single-cell RNA-seq, whole-exome sequencing, whole-genome sequencing, copy number, mutation, structural variant, CRISPR screen, proteomic, or other omics datasets as appropriate. This person will build and apply rigorous analyses of genomic, transcriptomic, functional genomic, and clinical-translational datasets to identify vulnerabilities, prioritize targets, nominate biomarkers, and connect preclinical findings to patient populations.
Post Doctoral Research Fellow- Computational Scientist, Biostatistics and Spatial Transcriptomics Memorial Sloan Kettering Cancer CenterPost Doctoral Research Fellow- Computational Scientist, Biostatistics and Spatial TranscriptomicsNew York, New York$72,000–$87,564 / yearSpatial Architecture & Niche Profiling: Implement advanced spatial point pattern analysis, cell-cell interaction modeling, and neighborhood/niche identification to map cell-to-cell spatial proximity and architectural differences within the tumor microenvironment across distinct clinical cohorts. You will develop and apply innovative statistical frameworks to map the tumor immune microenvironment (TIME), decode multi-cellular architectural niches, and collaborate closely with a multidisciplinary team of computational biologists, statisticians, and surgeons.
Manager, Computational Biology (Early Oncology) Recursion PharmaceuticalsManager, Computational Biology (Early Oncology)New York, NY$166,980–$220,600 / yearPowered by proprietary multimodal data, purpose-built AI models, and bilingual teams fluent in both science and AI, the Recursion OS is designed to translate complex science into medicines that matter - faster, better, and at scale - for patients who are waiting. Your mission is to integrate Recursion's massive datasets-phenomics, transcriptomics, and proteomics-to nominate novel targets, validate disease biology, and define the precision oncology strategies that ensure our medicines reach the right patients.
Senior AI/ML Engineer - Research Data AI and Predictive Modeling (Vaccine R&D) PfizerSenior AI/ML Engineer - Research Data AI and Predictive Modeling (Vaccine R&D)Pearl River, New York$139,100–$231,900 / yearEmbedded within Vaccines Research and supporting viral/bacterial vaccine programs, the successful candidate will lead implementation of a modern AI-ready research data ecosystem that enables advanced analytics, predictive modeling, generative AI applications, and agentic scientific workflows. Master’s degree in Computer Science, Machine Learning, Computational Biology, Software Engineering, AI, or a related discipline and a minimum of 4 years of applied AI/ML experience in R&D, Life Sciences or other related discovery focused environment.
Senior Ai/Ml Engineer - Research Data AI And Predictive Modeling (Vaccine R&D) PfizerSenior Ai/Ml Engineer - Research Data AI And Predictive Modeling (Vaccine R&D)Pearl River, NY$139,100–$231,900 / yearEmbedded within Vaccines Research and supporting viral/bacterial vaccine programs, the successful candidate will lead implementation of a modern AI-ready research data ecosystem that enables advanced analytics, predictive modeling, generative AI applications, and agentic scientific workflows. Master's degree in Computer Science, Machine Learning, Computational Biology, Software Engineering, AI, or a related discipline and a minimum of 4 years of applied AI/ML experience in R&D, Life Sciences or other related discovery focused environment.
Senior Software Engineer & Project Lead, Biology Simmons FoundationSenior Software Engineer & Project Lead, BiologyNy, NY$190,000–$235,000 / yearThe Center for Computational Biology is seeking an experienced software engineer to be the Project Lead for HumanBase (hb.flatironinstitute.org), a dynamic and interactive web-based platform that supports thousands of biomedical researchers in exploring the molecular mechanisms of human disease. The successful candidate will lead technical direction and execution, guide other software engineers, and collaborate closely with researchers at the Center for Computational Biology to translate cutting-edge computational biology into robust software tools.
Senior Software Engineer, Genomics Simmons FoundationSenior Software Engineer, GenomicsNy, NY$160,000–$200,000 / yearThey will also have experience processing large-scale -omics datasets, maintaining production software systems, designing and optimizing data-intensive pipelines, and supporting machine learning workflows in scientific computing environments. The Center for Computational Biology (CCB) is seeking an experienced senior software engineer to join a growing team of developers within CCB and the other centers across the Flatiron Institute who help build and maintain HumanBase.
Senior Computational Biologist - Early Discovery Oncology Recursion PharmaceuticalsSenior Computational Biologist - Early Discovery OncologyNew York, NY$166,980–$220,660 / yearYour mission is to integrate Recursion's massive datasets-phenomics, transcriptomics, genomics, proteomics-to nominate novel targets, validate disease biology, and define the precision oncology strategies to advance our most promising therapeutic targets into full-fledged drug discovery programs. Powered by proprietary multimodal data, purpose-built AI models, and bilingual teams fluent in both science and AI, the Recursion OS is designed to translate complex science into medicines that matter - faster, better, and at scale - for patients who are waiting.
Senior Computational Biologist - Early Discovery Immunology Recursion PharmaceuticalsSenior Computational Biologist - Early Discovery ImmunologyNew York, NY$166,980–$220,660 / yearYour mission is to integrate Recursion's massive datasets-phenomics, transcriptomics, genomics, proteomics-to nominate novel targets, validate disease biology, and define the precision I&I strategies to advance our most promising therapeutic targets into full-fledged drug discovery programs. Powered by proprietary multimodal data, purpose-built AI models, and bilingual teams fluent in both science and AI, the Recursion OS is designed to translate complex science into medicines that matter - faster, better, and at scale - for patients who are waiting.