Associate Director, Bioinformatics Rhythm PharmaceuticalsAssociate Director, BioinformaticsBoston, MARemoteA core focus of this position will be the development and implementation of algorithmic phenotyping approaches using electronic medical records (EMR) and real-world datasets, enabling robust patient stratification, cohort definition, and integration with genomics and biomarker data. Opportunity Overview We are seeking a highly motivated Associate Director of Data Science within Rhythm's Research group and the Data Sciences Team in support of our clinical, regulatory, and scientific objectives in the rare neuroendocrine/obesity/metabolic disease.
Bioinformatics Leader ZSBioinformatics LeaderBoston, MassachusettsZSD’s bioinformatics team delivers work spanning multi-omics analysis, computational biology, GxP pipeline development, and platform architecture for some of the world’s largest pharma and biotech companies. Design and implement computational workflows for analysis of multi-omic data (genomics, transcriptomics, proteomics) in drug discovery and translational contexts.
Computational Biology & Bioinformatics Lead Institute for Protein InnovationComputational Biology & Bioinformatics LeadBoston, MassachusettsThe Institute's deep protein expertise, collaborative spirit and research tools are powering new biomedical and therapeutic discoveries with a growing community of researchers at Harvard Medical School, Boston Children's Hospital and other institutions across Greater Boston and beyond. Founded in 2017 and located in Boston’s Longwood Medical Area, the Institute’s three-pronged strategy is to build protein tools, conduct related internal research and develop educational programs for the protein science and biological research communities.
Bioinformatics Engineer Daley and AssociatesBioinformatics EngineerBoston, MARemote$70–$75 / hourAs a key member of a small engineering team, you will take ownership of designing, building, testing, and maintaining critical software components that support genomic data processing and analysis. This role combines software engineering, systems optimization, and bioinformatics expertise to support the development of high-throughput genomic analysis workflows in a regulated production environment.
NewPart-time Lecturer, Bioinformatics (Boston) Northeastern UniversityPart-time Lecturer, Bioinformatics (Boston)Boston, MASuch graduate courses seek experienced bioinformatics, biotech, and data science professionals with a desire to teach for the Bioinformatics Professional Science Master's (PSM) Program depending upon the programs' needs and enrollment. Courses include primarily biological science courses with minor algorithmic components and primarily programming courses with a focus on bioinformatics methods.
Senior Bioinformatics Engineer Moderna IncSenior Bioinformatics EngineerCambridge, MA$145,900–$234,200 / yearWe are proud to have been recognized as a Science Magazine Top Biopharma Employer, a Fast Company Best Workplace for Innovators, and a Great Place to Work in the U.S. If you want to make a difference and join a team that is changing the future of medicine, we invite you to visit modernatx.com/careers to learn more about our current opportunities. You will play a key role in maintaining continuous software operations, supporting validation activities, enhancing automation capabilities, and collaborating with multidisciplinary teams to strengthen the robustness of scientific software platforms.
Senior Bioinformatics Engineer II ModernaTXSenior Bioinformatics Engineer IICambridge, MassachusettsWe are proud to have been recognized as a Science Magazine Top Biopharma Employer, a Fast Company Best Workplace for Innovators, and a Great Place to Work in the U.S. If you want to make a difference and join a team that is changing the future of medicine, we invite you to visit modernatx.com/careers to learn more about our current opportunities. You will play a key role in maintaining continuous software operations, supporting validation activities, enhancing automation capabilities, and collaborating with multidisciplinary teams to strengthen the robustness of scientific software platforms.
Bioinformatics Software Engineer Dana-Farber Cancer Institute IncBioinformatics Software EngineerBOSTON, MA$112,000–$132,100 / yearThe Department of Informatics and Analytics (I&A) at Dana-Farber is looking for highly motivated bioinformatics software or data engineer who is passionate about the potential for molecular data to support clinical care of Dana-Farber patients and the groundbreaking discoveries that are a product of genomic data integration and analysis. The developed products will enable researchers at DFCI to efficiently manage their molecular and biomedical record data in the cloud environment, launch and monitor containerized data analysis workflows, and visualize the results.
NewHigh Performance Computing Engineer Watershed Informatics, Inc.High Performance Computing EngineerBoston, MAJoin a team that's intellectually curious with a bias for action, headquartered in Cambridge, Massachusetts, composed of people who have come together to enable outcomes while empowering the research of all those committed to changing lives - all while bringing transformational change to a $40 billion industry. Watershed enables scientists to conduct all essential analysis - from lab data to plot - with a single software platform.
Data Scientist - Computational Biology Penfield Search PartnersData Scientist - Computational BiologyWaltham, MAThe ideal candidate has hands-on experience with RNA sequencing data, strong computational biology expertise, and enjoys collaborating closely with experimental scientists to generate biological insights that advance therapeutic discovery. This individual will support drug discovery research by processing, analyzing, visualizing, and interpreting next-generation sequencing (NGS) datasets, with a strong emphasis on transcriptomics and long-read sequencing technologies.
Data Scientist Contractor, Computational Biology CAMP4 Therapeutics CorpData Scientist Contractor, Computational BiologyCambridge, MAKey Responsibilities: Process, analyze, visualize, and interpret next-generation sequencing (NGS) datasets, with an emphasis on bulk RNA-seq, scRNAseq, and long-read RNA sequencing, including Nanopore and PacBio sequencing data. CAMP4 is seeking a Data Science Contractor for a 6-month temporary contract assignment, specializing in Computational Biology, Bioinformatics, or Systems Biology, to support the processing, analysis, visualization, and interpretation of next-generation sequencing datasets.
Scientist, Computational Biology Flagship Pioneering IncScientist, Computational BiologyCambridge, MA$115,000–$165,000 / yearThe successful candidate will be a driven, experienced scientist who is enthusiastic about developing state-of-the-art techniques to pioneer the detection of cellular dynamics from minimally invasive biospecimens. Strong hands-on experience analyzing mass spectrometry-based proteomics data is required; direct experience with raw mass spec data processing, QC, normalization, and feature extraction is strongly preferred.
Associate Director - Computational Biology (Cardiovascular, Metabolic, Obesity And Related) Amgen Inc.Associate Director - Computational Biology (Cardiovascular, Metabolic, Obesity And Related)Cambridge, MA$182,465–$246,865 / yearThe Computational Biology group in the Center for Technology and Innovation (CfTI) within the Precision Medicine organization at Amgen is seeking a highly motivated Computational Biologist with expertise in analyzing clinical biomarker data, including but not limited to metabolomics, genomics, transcriptomics, proteomics, spatial-omics, flow cytometry, immunoassays, and other biomarker assays. In addition to the base salary, Amgen offers a Total Rewards Plan, based on eligibility, comprising of health and welfare plans for staff and eligible dependents, financial plans with opportunities to save towards retirement or other goals, work/life balance, and career development opportunities that may include: A comprehensive employee benefits package, including a Retirement and Savings Plan with generous company contributions, group medical, dental and vision coverage, life and disability insurance, and flexible spending accounts.
Associate Director - Computational Biology (Cardiovascular, Metabolic, Obesity and Related) Amgen IncAssociate Director - Computational Biology (Cardiovascular, Metabolic, Obesity and Related)Cambridge, MA$182,465–$246,865 / yearThe Computational Biology group in the Center for Technology and Innovation (CfTI) within the Precision Medicine organization at Amgen is seeking a highly motivated Computational Biologist with expertise in analyzing clinical biomarker data, including but not limited to metabolomics, genomics, transcriptomics, proteomics, spatial-omics, flow cytometry, immunoassays, and other biomarker assays. In addition to the base salary, Amgen offers a Total Rewards Plan, based on eligibility, comprising of health and welfare plans for staff and eligible dependents, financial plans with opportunities to save towards retirement or other goals, work/life balance, and career development opportunities that may include: A comprehensive employee benefits package, including a Retirement and Savings Plan with generous company contributions, group medical, dental and vision coverage, life and disability insurance, and flexible spending accounts.
Scientist, Computational Sensing Flagship Pioneering IncScientist, Computational SensingCambridge, MA$115,000–$165,000 / yearMaster''s degree plus 3+ years of relevant industry experience, or PhD in Computational Biology, Biophysics, Bioengineering, Physics, Applied Mathematics, Computer Science, Electrical Engineering, or a related quantitative discipline. This role sits at the intersection of biology, physics, signal processing, and machine learning - you will work directly with experimental scientists and engineers to develop methods that transform complex biological measurements into actionable scientific insight.
Senior Associate Scientist, Cellular Genomics Pfizer IncSenior Associate Scientist, Cellular GenomicsCambridge, MA$68,600–$114,300 / yearExperience with genomics data analysis, quality control, visualization, or reproducible bioinformatic workflows for bulk RNA sequencing, single-cell and single-nucleus RNA sequencing, spatial transcriptomics, targeted sequencing, immune repertoire sequencing, epigenomics assays, or related genomic technologies. Bachelor's degree in Bioinformatics, Computational Biology, Genomics, Systems Biology, Computer Science & Molecular Biology, Data Science with biological applications, Biological Sciences with significant computational biology course work, or a related discipline with 0-3 years of relevant experience.
Director, Computational Biology Ionis Pharmaceuticals IncDirector, Computational BiologyBoston, MA$157,542–$206,759 / yearWith multiple marketed medicines and a leading pipeline in neurology, cardiology and select areas of high patient needs, we continue to drive innovation in RNA therapies in addition to advancing new approaches in gene editing to provide greater value to patients and are well positioned financially to deliver on our strategic goals. Well-suited candidates will have a systems level approach to understanding biology that harmonizes multiple interacting functional inputs including transcriptional regulation, protein function and larger order (cellular and tissue) biochemical relationships.
Senior Scientist, Cellular Genomics Pfizer IncSenior Scientist, Cellular GenomicsCambridge, MA$93,600–$156,000 / yearThe role will also include targeted wet-lab genomic contributions, including study design input, sample-processing strategy, assay-quality review, and limited hands-on support for single-cell, sequencing, or spatial workflows when needed to ensure data quality and interpretability. The candidate should be able to connect disease biology, perturbational responses, pharmacology, and translational context into mechanistic interpretations of drug-candidate effects in collaboration with project scientists, wet-lab genomics experts, translational teams, and computational biology partners.
Senior Scientist, Computational Biotherapeutics Engineering PfizerSenior Scientist, Computational Biotherapeutics EngineeringCambridge, MA$93,600–$156,000 / yearPhD in biochemistry, computational chemistry, computational biology, machine learning, or a related field with 0 t 3 years of experience OR Master's Degree in biochemistry, computational chemistry, computational biology, machine learning with 7 to 8 years of experience OR BA/BS with 9 to 11 years of experience. Implement advanced cutting-edge AI and machine learning workflows for computational protein design (including fine-tuning protein language models and generative protein design) in HPC or scalable cloud computing environments.
Principal Scientist, Computational Protein Design ModernaTXPrincipal Scientist, Computational Protein DesignCambridge, MassachusettsWe are proud to have been recognized as a Science Magazine Top Biopharma Employer, a Fast Company Best Workplace for Innovators, and a Great Place to Work in the U.S. If you want to make a difference and join a team that is changing the future of medicine, we invite you to visit modernatx.com/careers to learn more about our current opportunities. This individual will work in close partnership with structural biology, directed evolution, immunology, translational science, and program teams to advance platform innovation and therapeutic programs across Moderna’s Research and Early Development portfolio.