25 Results for

Bioinformatics Jobs in San Francisco, CA

Jobs

South San Francisco, CA15 days ago

$45–$65 Per Hour
Full-time
Employee

Within this group, the Digital Pathology team focuses on revolutionizing the analysis of digital histopathology slides by leveraging computational methods to enhance pathological evaluations traditionally performed solely by humans. The role requires close collaboration with pathologists to design and execute image analysis workflows tailored to biological questions, as well as working with computational and data scientists across various departments.

South San Francisco, CA12 days ago

$130,000–$173,000

It has raised $57 million led by Alpha Wave Ventures, and joined by other leading life sciences investors ARCH Venture Partners, Future Ventures, GV, Khosla Ventures and YK Bioventures. Moonwalk’s discovery platform has resulted in novel adipose targets from deep genetic and epigenetic associations, advanced AI prediction tools, and profiling of primary human samples.

South San Francisco, CA30+ days ago

In this role, you will work at the intersection of computational and molecular biology, developing advanced DNA sequence analysis pipelines, gene design algorithms, and predictive models to optimize DNA synthesis and assembly. You will collaborate with molecular biologists, product teams, and manufacturing engineers to refine client’s core synthetic biology platform, troubleshoot assembly challenges, and improve DNA synthesis efficiency.

SF, CA19 days ago

$170,000–$190,000 Per Year

Every team member plays a crucial role in driving the future of biotech research, building the world's most efficient sequencing engine that operates overnight and scales globally. This role is heavily bioinformatics-focused, emphasizing deep domain expertise and the building of scalable products over general software platform skills.

New!

Foster City, CA2 days ago

$60–$80.50 Per Hour

This is a 12 month contract Bioinformatics Engineer role to deliver telomere to telomere (T2T) reference genomes for non model organisms by building and operating long read assembly and curation pipelines using PacBio HiFi and/or Oxford Nanopore, with complementary data (Hi C/Omni C, Strand seq, optical maps, short reads) as needed. You will partner with wet lab and computational teams to troubleshoot complex genomes (polyploidy, high heterozygosity, repeats) and package results for internal and external release.

New!

Foster City, CA1 day ago

$70–$80 Per Hour
Temporary

DescriptionBioinformatics Engineer role to deliver telomere to telomere (T2T) reference genomes for non model organisms by building and operating long read assembly and curation pipelines using PacBio HiFi and/or Oxford Nanopore, with complementary data (Hi C/Omni C, Strand seq, optical maps, short reads) as needed. Workflow + compute operations experience: Nextflow/Snakemake/WDL; running large genomics workloads on on prem HPC (e.g., Slurm/LSF) and AWS (e.g., Batch/HealthOmics), with cost aware scaling.

New!

Foster City, CA1 day ago

$70–$78

Work Type: OnsiteBioinformatics Engineer - T2T Genome Assembly (Non model Organisms)This is a 12 month contract Bioinformatics Engineer role to deliver telomere to telomere (T2T) reference genomes for non model organisms by building and operating long read assembly and curation pipelines using PacBio HiFi and/or Oxford Nanopore, with complementary data (Hi C/Omni C, Strand seq, optical maps, short reads) as needed. Workflow + compute operations experience: Nextflow/Snakemake/WDL; running large genomics workloads on on prem HPC (e.g., Slurm/LSF) and AWS (e.g., Batch/HealthOmics), with cost aware scaling.

New!

Foster City, CA1 day ago

$75.50–$80.50 Per Hour

Responsibilities:Bioinformatics Engineer role to deliver telomere to telomere (T2T) reference genomes for non model organisms by building and operating long read assembly and curation pipelines using PacBio HiFi and/or Oxford Nanopore, with complementary data (Hi C/Omni C, Strand seq, optical maps, short reads) as needed. Workflow + compute operations experience: Nextflow/Snakemake/WDL; running large genomics workloads on on prem HPC (e.g., Slurm/LSF) and AWS (e.g., Batch/HealthOmics), with cost aware scaling.

Novato, CA30+ days ago

Full-time

This individual will design and deploy causal inference pipelines, longitudinal and multiscale temporal models, and multimodal data integration approaches connecting omics, clinical phenotypes, and wearable-derived physiological signals. The Senior Computational Scientist will play a central role in a large funded research project focused on identifying causal drivers and mechanistic pathways underlying resilience, aging trajectories, and functional decline.

Novato, CA11 days ago

Full-time

The Furman Lab at the Buck Institute for Research on Aging invites applications for a Senior Scientist or Postdoctoral Researcher to join a newly initiated, five-year government-funded research program focused on understanding the mechanisms of aging and developing interventions to extend healthspan. In addition to their research role within the project, the successful candidate will serve as Co-Director of the Buck Institute’s Bioinformatics and Data Science Core, playing a central role in expanding the Core’s capacity, service offerings, and scientific impact across the Institute.

South San Francisco, CA30+ days ago

$135,000–$170,000

About Us Deep Apple Therapeutics, part of the Apple Tree Partners (ATP) portfolio, is a Bay Area biotechnology company focused on accelerating drug discovery by integrating molecular docking and structural biology with advanced computer-aided drug design (CADD) technologies. Our state-of-the-art platform combines advanced computational modeling, large-scale compound docking, cryo-EM-based structural biology, and deep learning to drive the efficient identification and development of novel therapeutics.

New!

San Francisco, CAToday

Using your blend ofcomputational expertise and in-depth biochemical understanding of proteins, you will generate insights to improve protein functionality and operate at the interface between our machine learning and experimental platform units, working closely to seamlessly integrate AI generations and lab validation data. You have a proven track record of running protein design campaigns end-to-end, successfully leveraging novel computational tools and knowledge of biochemistry or structural biology to design proteins to functional requirements and applications in synthetic biology.

New!

San Francisco, CAToday

Output Biosciences is currently in stealth, operated by a team of repeat founders and biotech veterans with multiple exits in AI and biology, and backed by top VCs including Y Combinator. Healthy feedback focused environment to help you strive - leadership will have high expectations, regularly share constructive feedback, support you and help you grow, and welcome receiving feedback and ideas from you .

New!

Berkeley, CAToday

$135,300–$178,350 Per Year

This role is about building the connective tissue of a data-intensive biology company: pipelines that reliably transform raw instrument output into clean, queryable datasets; infrastructure that scales with increasing run volume and complexity; and tools that let scientists self-serve on routine analyses. Deploy and maintain data visualization tools (dashboards, interactive browsers) that allow scientists to independently explore sequencing metrics: yields, classification accuracy, plate-level comparisons, signal quality trends.

Novato, CA30+ days ago

Full-time

This individual will help develop new computational methods, analyze complex imaging datasets, and work closely with experimental and computational researchers to generate insights from large-scale biological data. Prior experience in biological or biomedical imaging is helpful but not required for candidates with strong technical expertise and a genuine interest in applying frontier AI methods to major biological questions.

New!

South San Francisco, CA6 days ago

$61–$64

San Carlos, CA30+ days ago

$120,000–$150,000

PhD in molecular biology, genomics, bioengineering, or related field, OR equivalent industry experience defined as 8+ years in NGS assay development with at least one shipped IVD, LDT, or commercially deployed assay. By creating a fully automated platform that brings together DNA sequencing, robotics, and cloud-based analytics, Clear Labs democratizes genomics applications to deliver better clarity.

Novato, CA30+ days ago

Full-time

The Ellerby and Gerencser labs at the Buck Institute seek a Postdoctoral Researcher (PhD required) with expertise in microscopy-based image processing, machine vision, and data operations supporting high-throughput small molecule screening. As a leading independent non-profit research institute in Marin County, CA, the Buck brings together experts across multiple disciplines to prevent or delay age-related diseases, including Alzheimer’s, Parkinson’s, cancer, cardiovascular disease, and diabetes.

South San Francisco, CA30+ days ago

Responsibilities: Collaborate with scientists in Human Genetics department to analyze large datasets of genetic, genomic, and clinical data from internal studies (including our clinical trials and high throughput screens), collaborations with academic and industry partners, and public external data sets . Role Overview: The Human Genetics department at the client site is seeking a highly independent computational scientist with a strong hands-on analytical background in genetic epidemiology, statistical genetics, or computational biology, to develop and apply analytical approaches to integrate and interpret genetic, genomic, and clinical data.

New!

San Francisco, CAToday

$64,480–$76,980 Per Year

The postdoctoral fellow will have access to large-scale experimental data and state-of-the-art computational infrastructure to accomplish their research goals and will work in highly collaborative environment with computational and experimental biologists, synergizing the strengths of both domains to advance discoveries in network inference algorithms and the mechanisms of gene regulation. The laboratory of Christina Theodoris, MD, PhD, is seeking a highly motivated postdoctoral fellow with background in deep learning or network inference to join her research program in the Gladstone Institute of Cardiovascular Disease and Gladstone Institute of Data Science and Biotechnology.

New!

Sunnyvale, CAToday

Throughout the strategy, design, and development lifecycle, you will work collaboratively with your design team, alongside engineers, product managers, and scientists, building future-forward experiences that leverage agentic AI capabilities to accelerate drug discovery, improve patient outcomes, and transform healthcare delivery. Your role is to identify opportunities across experiences and resolve gaps in our product strategy, building inter-operational product experiences that solve for those opportunities while ensuring AI-assisted experiences remain transparent, trustworthy, and grounded in real human needs.

New!

San Francisco, California4 days ago

Remote

$80–$150 Per Hour

PhD in Biology, Chemistry, Biochemistry, Computational Biology, Translational Science, or related fields. For details about the interview process and platform information, please check: https://talent.docs.mercor.com/welcome.

South San Francisco, CA30+ days ago

$160,000–$185,000 Per Year

Strong track record of embedding DevOps capabilities directly within R&D or scientific teams, supporting rapid iteration and experimental workflows, with demonstrated deep analytical skills applied to troubleshooting code and resolving infrastructure issues. We are seeking a Senior DevOps Engineer to join the Technology Department to serve as a key technical partner enabling cloud-based scientific computing and drug discovery efforts focused on G-protein-coupled receptors (GPCRs).

San Francisco, CA30+ days ago

By combining data, technology and expertise, Form's solutions accelerate timelines from discovery to clinic by providing drug developers with rapid in silico characterization and optimization of their therapeutics — enabling higher yields, better expression, enhanced safety and shorter, less-expensive development cycles. With cross-disciplinary expertise spanning software engineering, biology, bioinformatics, AI, data science and wet lab validation, the Form Bio team collaborates closely with customers on their most pressing and strategic challenges and opportunities.

New!

San Francisco, CA2 days ago

This individual will serve as a key scientific and operational leader inside the company, partnering closely with computational scientists, experimental scientists (own lab), platform teams, translational biology, external collaborators, and executive leadership to prioritize programs, guide strategic decisions, and accelerate pipeline execution. This is a critical executive leadership role for a hands-on scientific leader who has spent significant time navigating the realities of drug discovery and development — someone who understands not only what can work scientifically, but what actually translates into successful therapeutic programs.

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Bioinformatics Jobs in San Francisco, CA

Computational Pathology Scientist Talent Software Services

Scientist/Engineer, Machine Learning / Bioinformatics Moonwalk Biosciences, Inc.

Senior Bioinformatics Scientist CEDENT

Bioinformatics Scientist Vivo HealthStaff

Associate Scientist - Bioinformatics V Lancesoft

Associate Scientist - Bioinformatics Jobs in USA, CA, Foster City | Rose International Job Rose International

Bioinformatics Engineer TekWissen LLC

Bioinformatics Engineer Iconma

Senior Computational Scientist – Furman Lab Buck Institute

Senior Scientist or Postdoctoral Researcher-Furman Lab Buck Institute

Principal Scientist, Computational Chemistry Deep Apple Therapeutics

Computational Protein Designer Latent Labs

Research Intern, Machine Learning Output Biosciences

Data Infrastructure Engineer Glyphic Biotechnologies

Data Scientist / AI Scientist – AI for Aging Research – Zhou lab Buck Institute

Computational Pathology Scientist IT Engagements

Senior / Staff Scientist, Assay Automation Clear Labs

Postdoctoral Researcher - Age Rejuvenation Screening & Data Analysis Buck Institute

Computational Scientist: Human Genetics Compass Consulting

Computational Postdoctoral Scholar - Theodoris Lab Gladstone Institutes

Sr. UX Designer, AWS Applied AI Solutions Amazon

Research Biologist Mercor

Senior DevOps Engineer – Research Cloud & Scientific Computing (AWS)(Biotech industry experience required) Septerna

Form Bio Internship: Scientific Strategy & Operations Form Bio

VP/SVP of Drug Discovery Deep Origin

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